Institut für
FI Fischereiökologie
Publikationen von Yassine Kasmi als Thünen-Mitarbeiter
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Kasmi Y, Núñez-Riboni I, Blancke T, Möckel B, Bernreuther M, Stransky C, Hanel R (2025) Fish diversity assessment and semi-quantitative biomass estimation through metabarcoding of environmental DNA. Ecol Indic 173:113406, DOI:10.1016/j.ecolind.2025.113406
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Kasmi Y, Eschbach E (2025) SOP-006 DNA extractions from fish tissue. Göttingen: OpenAgrar, 6 p, DOI:10.3220/253-2025-156
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Eschbach E, Kasmi Y (2025) SOP-007 DNA extraction from marine sediments. Göttingen: OpenAgrar, 6 p, DOI:10.3220/253-2025-157
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Kasmi Y, Eschbach E (2025) SOP-008 RNase treatment of DNA extracts. Göttingen: OpenAgrar, 6 p, DOI:10.3220/253-2025-158
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Blancke T, Kasmi Y, Hanel R (2025) SOP-019 qPCR assay for the quantification of cod (Gadus morhua) environmental DNA. Göttingen: OpenAgrar, 18 p, DOI:10.3220/253-2025-161
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Hanel R, Kasmi Y, Blancke T (2025) SOP-020 Metabarcoding protocol-12S rRNA Miya. Göttingen: OpenAgrar, 20 p, DOI:10.3220/253-2025-162
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Kasmi Y, Postel U, Hanel R (2025) SOP-023 DNA extraction magnetic beads. Göttingen: OpenAgrar, 7 p, DOI:10.3220/253-2025-164
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Kasmi Y, Möckel B, Postel U, Hanel R (2025) SOP-024 RADseq library preparation. Göttingen: OpenAgrar, 16 p, DOI:10.3220/253-2025-165
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Kasmi Y, Neumann H, Haslob H, Blancke T, Möckel B, Postel U, Hanel R (2024) Comparative analysis of bottom trawl and nanopore sequencing in fish biodiversity assessment: The Sylt outer reef example. Mar Environ Res 199:106602, DOI:10.1016/j.marenvres.2024.106602
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Lumbierres M, Abecasis D, Alcaraz-Segura D, Alison J, Álvarez-Presas M, Anderle M, Avci F, Bajocco S, Baldo M, Beja P, Bergamini A, Bergami C, Blanco-Aguiar JA, Boada J, Bonn A, Borges PAV, Borgwardt F, Dahlkamp A, Hunger S, Kasmi Y, et al (2024) EuropaBON EBV workflow templates. Genève: Zenodo, 297 p, DOI:10.5281/zenodo.10971094
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Kasmi Y, Bernreuther M, Hanel R, Stransky C, Blancke T, Möckel B (2024) Water eDNA metabarcoding: mifish primer dataset [Datenpublikation] [online]. Genève: Zenodo, zu finden in <https://zenodo.org/records/11242794> [zitiert am 22.01.2025], DOI:10.5281/zenodo.11242794
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Kasmi Y, Blancke T, Eschbach E, Möckel B, Casas L, Bernreuther M, Nogueira P, Delfs G, Kadhim S, Meißner T, Rödiger M, Eladdadi A, Stransky C, Hanel R (2023) Atlantic cod (Gadus morhua) assessment approaches in the North and Baltic Sea: A comparison of environmental DNA analysis versus bottom trawl sampling. Front Mar Sci 10:1058354, DOI:10.3389/fmars.2023.1058354
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Kasmi Y, Eschbach E, Hanel R (2023) Mare-MAGE curated reference database of fish mitochondrial genes. BMC Genomic Data 24:18, DOI:10.1186/s12863-023-01119-4
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Kasmi Y, Eschbach E, Hanel R (2022) Mare-MAGE database A curated reference database of fish mitochondrial genes [Datenpublikation] [online]. London: figshare, zu finden in <https://figshare.com/collections/Mare-MAGE_database_A_curated_reference_database_of_fish_mitochondrial_genes/5410161/5> [zitiert am 04.12.2024], DOI:10.6084/m9.figshare.c.5410161.v5
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Kasmi Y, Eschbach E, Hanel R (2021) Mare-MAGE database A curated reference database of fish mitochondrial genes [Datenpublikation] [online]. Iasi, London, Boston: figshare, figshare collection, zu finden in <https://doi.org/10.6084/m9.figshare.c.5410161.v5> [zitiert am 16.01.2023], DOI:10.6084/m9.figshare.c.5410161.v5
